Roger Vargas

Population structure, biogeography and transmissibility of Mycobacterium tuberculosis

Luca Freschi, Roger Vargas, Ashaque Husain et al. · Nature Communications · 2021 · 162 citations · Full text

GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning

Matthias I. Gröschel, Martin Owens, Luca Freschi et al. · Genome Medicine · 2021 · 72 citations · Full text

Role of Epistasis in Amikacin, Kanamycin, Bedaquiline, and Clofazimine Resistance in Mycobacterium tuberculosis Complex

Roger Vargas, Luca Freschi, Andrea Spitaleri et al. · Antimicrobial Agents and Chemotherapy · 2021 · 69 citations · Full text

In-host population dynamics of Mycobacterium tuberculosis complex during active disease

Roger Vargas, Luca Freschi, Maximillian G. Marin et al. · eLife · 2021 · 65 citations · Full text

Benchmarking the empirical accuracy of short-read sequencing across the<i>M. tuberculosis</i>genome

Maximillian G. Marin, Roger Vargas, Michael A. Harris et al. · Bioinformatics · 2022 · 61 citations · Full text