Lane Votapka - Concepedia

Author

Lane Votapka

University of California San Diego ORCID

Also Known As

Kearns, Fiona L, Lane Votapka, Lane W. Votapka, Lane William Votapka, Votapka, Lane W.

Publications

1.1K

Citations

H-Index

Concepts

All Affiliations

University of California San Diego University of California, Irvine

About

Lane Votapka is an author at University of California San Diego specializing in biophysics, molecular dynamics, and molecular biology.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Engineering	3	3	113
2	Medicine	3	3	125
3	Natural Sciences	3	3	83
4	Biomedical Engineering	1	1	50
5	Cell Biology	1	1	55

Lane Votapka

Publications

Citations

H-Index

Page 1

	Year	Citations
POVME 2.0: An Enhanced Tool for Determining Pocket Shape and Volume Characteristics Jacob D. Durrant, Lane Votapka, Jesper Givskov Sørensen, Journal of Chemical Theory and Computation	2014	235
Weighted Implementation of Suboptimal Paths (WISP): An Optimized Algorithm and Tool for Dynamical Network Analysis Adam T. Van Wart, Jacob D. Durrant, Lane Votapka, Journal of Chemical Theory and Computation	2014	192
Mechanism of 150-cavity formation in influenza neuraminidase Rommie E. Amaro, Robert V. Swift, Lane Votapka, Nature Communications	2011	145
SEEKR: Simulation Enabled Estimation of Kinetic Rates, A Computational Tool to Estimate Molecular Kinetics and Its Application to Trypsin–Benzamidine Binding Lane Votapka, Benjamin R. Jagger, Alexandra L. Heyneman, The Journal of Physical Chemistry B	2017	98
Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning Lane Votapka, Rommie E. Amaro PLoS Computational Biology	2015	81
SARS-CoV-2 evolved variants optimize binding to cellular glycocalyx Sang Hoon Kim, Fiona L. Kearns, Mia A. Rosenfeld, Cell Reports Physical Science Viral EvolutionViral DiagnosticsSpike-heparan Sulfate-ace2Viral PathogenesisGlycobiology	2023	55
Two Relations to Estimate Membrane Permeability Using Milestoning Lane Votapka, Christopher T. Lee, Rommie E. Amaro The Journal of Physical Chemistry B Membrane StructureComplicated Damping ConditionsMembrane FormationEngineeringPassive Permeation Rates	2016	50
SEEKR2: Versatile Multiscale Milestoning Utilizing the OpenMM Molecular Dynamics Engine Lane Votapka, Andrew Stokely, Anupam Anand Ojha, Journal of Chemical Information and Modeling Molecular KineticsChemical KineticsEngineeringPhysicsNatural Sciences	2022	41
A Computational Assay that Explores the Hemagglutinin/Neuraminidase Functional Balance Reveals the Neuraminidase Secondary Site as a Novel Anti-Influenza Target Rommie E. Amaro, Pek U. Ieong, Gary Huber, ACS Central Science	2018	26
Brownian dynamics simulations of biomolecular diffusional association processes Abraham Muñiz‐Chicharro, Lane Votapka, Rommie E. Amaro, Wiley Interdisciplinary Reviews Computational Molecular Science EngineeringMolecular BiologyAbstract Brownian DynamicsBd MethodBrownian Dynamics Simulations	2022	22

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