Alex C. Soupir

spatialGE: quantification and visualization of the tumor microenvironment heterogeneity using spatial transcriptomics

Oscar E. Ospina, Christopher M. Wilson, Alex C. Soupir et al. · Bioinformatics · 2022 · 34 citations · Full text

Proteogenomic, Epigenetic, and Clinical Implications of Recurrent Aberrant Splice Variants in Clear Cell Renal Cell Carcinoma

Andrew Ying-Fei Chang, Nicholas H. Chakiryan, Dongliang Du et al. · European Urology · 2022 · 34 citations · Full text

Urology, Clinical Implications, Tumor Heterogeneity +7

Novel Use of Circulating Tumor DNA to Identify Muscle-invasive and Non–organ-confined Upper Tract Urothelial Carcinoma

Heather L. Huelster, Billie Gould, Elizabeth A. Schiftan et al. · European Urology · 2023 · 31 citations

Urology, Oncology, Genitourinary Cancer +9

spatialTIME and iTIME: R package and Shiny application for visualization and analysis of immunofluorescence data

Jordan H. Creed, Christopher M. Wilson, Alex C. Soupir et al. · Bioinformatics · 2021 · 27 citations · Full text

Cell-free DNA methylome profiling by MBD-seq with ultra-low input

Jinyong Huang, Alex C. Soupir, Liang Wang · Epigenetics · 2021 · 26 citations · Full text

Engineering, Epigenetic Change, Dna Methylation +19