Doublet identification in single-cell sequencing data using scDblFinder

Pierre‐Luc Germain, Aaron T. L. Lun, Will Macnair, +1

F1000Research

Doublet identification in single-cell sequencing data using scDblFinder

Pierre‐Luc Germain, Aaron T. L. Lun, Carlos Garcia Meixide, +2

F1000Research

Doublet FormationGeneticsGenomicsHigh Throughput SequencingSingle Cell Sequencing +16

Cell-type-specific cis-eQTLs in eight human brain cell types identify novel risk genes for psychiatric and neurological disorders

Julien Bryois, Daniela Calini, Will Macnair, +13

Nature Neuroscience

Neurodegenerative DiseasesPsychiatryNovel Risk GenesMedicineGenetics +10

Mapping human adult hippocampal neurogenesis with single-cell transcriptomics: Reconciling controversy or fueling the debate?

Giorgia Tosoni, Dilara Ayyildiz, Julien Bryois, +4

Neuron

psupertime: supervised pseudotime analysis for time-series single-cell RNA-seq data

Will Macnair, Revant Gupta, Manfred Claassen

Bioinformatics

TGF-β induces oncofetal fibronectin that, in turn, modulates TGF-β superfamily signaling in endothelial cells

Elisa Ventura, Michael Weller, Will Macnair, +6

Journal of Cell Science

snRNA-seq stratifies multiple sclerosis patients into distinct white matter glial responses

Will Macnair, Daniela Calini, Eneritz Agirre, +21

Neuron

Neurobiology Of DiseaseNeurogenomicsMolecular NeuroscienceNeurological DisorderMedicine +8

Single nuclei RNAseq stratifies multiple sclerosis patients into distinct white matter glial responses

Will Macnair, Daniela Calini, Eneritz Agirre, +19

Neurological DisorderWhite MatterImmunologyClinical NeurologyPathology +17

psupertime: supervised pseudotime inference for single cell RNA-seq data with sequential labels

Will Macnair, Manfred Claassen

EngineeringGeneticsTranscriptomics TechnologyGenomicsGene Expression Profiling +16

Fenebrutinib, a Bruton’s tyrosine kinase inhibitor, blocks distinct human microglial signaling pathways

Julie Langlois, Simona Lange, Martin Ebeling, +10

Journal of Neuroinflammation