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Sara Guckian Kosmaczewski, Tyson J. Edwards, Sung Min Han, +6

EMBO Reports

Sensitive and quantitative probing of pseudouridine modification in mRNA and long noncoding RNA

Wen Zhang, Matthew J. Eckwahl, Katherine I. Zhou, +1

RNA

Microbiome characterization by high-throughput transfer RNA sequencing and modification analysis

Michael Schwartz, Haipeng Wang, Jessica Pan, +12

Nature Communications

Analysis of the human immunodeficiency virus-1 RNA packageome

Matthew J. Eckwahl, Hélène Arnion, Siarhei Kharytonchyk, +4

RNA

Murine Leukemia VirusViral ReplicationMolecular VirologyPackage Cellular RnasSimilar Rnas +10

HIV protease cleaves the antiviral m6A reader protein YTHDF3 in the viral particle

Denise Jurczyszak, Wen Zhang, Sandra Terry, +7

PLoS Pathogens

Viral ReplicationMolecular VirologyHiv ProteaseMedicineHiv Protease Inhibitors +11

A Large-Scale Complex Haploinsufficiency-Based Genetic Interaction Screen in Candida albicans: Analysis of the RAM Network during Morphogenesis

Nikë Bharucha, Yeissa Chabrier‐Roselló, Tao Xu, +9

PLoS Genetics

Genetic Networks Inducing Invasive Growth in <i>Saccharomyces cerevisiae</i> Identified Through Systematic Genome-Wide Overexpression

Christian A. Shively, Matthew J. Eckwahl, Craig J. Dobry, +3

Genetics

Pseudouridines have context-dependent mutation and stop rates in high-throughput sequencing

Katherine I. Zhou, Wesley C. Clark, David W. Pan, +3

RNA Biology

GeneticsRna SplicingMolecular BiologyTranscriptomics TechnologyPseudouridine Sites +26

A retrovirus packages nascent host noncoding RNAs from a novel surveillance pathway

Matthew J. Eckwahl, Soyeong Sim, Derek D. Smith, +2

Genes & Development

Nascent HostViral ReplicationMolecular BiologyHost RnasSmall Nuclear Rnas +15

5-Methylcytosine RNA Modifications Promote Retrovirus Replication in an ALYREF Reader Protein-Dependent Manner

Matthew J. Eckwahl, Ruyi Xu, Julia Michalkiewicz, +4

Journal of Virology