Xiangyu Deng

Salmonella Serotype Determination Utilizing High-Throughput Genome Sequencing Data

Shaokang Zhang, Yanlong Yin, Marcus B. Jones et al. · Journal of Clinical Microbiology · 2015 · 414 citations · Full text

Molecular Epidemiology, Pathogen Detection, Genomics +18

SeqSero2: Rapid and Improved <i>Salmonella</i> Serotype Determination Using Whole-Genome Sequencing Data

Shaokang Zhang, Henk C. den Bakker, Shaoting Li et al. · Applied and Environmental Microbiology · 2019 · 325 citations · Full text

Mashtree: a rapid comparison of whole genome sequence files

Lee S. Katz, Taylor Griswold, Shatavia S. Morrison et al. · The Journal of Open Source Software · 2019 · 294 citations · Full text

Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings

Nicholas Feasey, James Hadfield, Karen H. Keddy et al. · Nature Genetics · 2016 · 214 citations · Full text

Molecular Epidemiology, Pathogenesis, Distinct Salmonella Enteritidis +10

Transcriptomic Response of <i>Escherichia coli</i> O157:H7 to Oxidative Stress

Siyun Wang, Kaiping Deng, Sam Zaremba et al. · Applied and Environmental Microbiology · 2009 · 161 citations · Full text

Molecular Biology, Food Processing Facilities, Redox Biology +17