An integrated encyclopedia of DNA elements in the human genome

Ian Dunham, Anshul Kundaje, Shelley Force Aldred, +440

The Journal of the American Medical Association (JAMA) Network (American Medical Association)

Integrative Analysis of the <i>Caenorhabditis elegans</i> Genome by the modENCODE Project

Mark Gerstein, Zhi John Lu, Eric L. Van Nostrand, +126

Science

Divergent lncRNAs Regulate Gene Expression and Lineage Differentiation in Pluripotent Cells

Sai Luo, Jiangbo Lu, Lichao Liu, +15

Cell stem cell

Cell LineageDevelopmental BiologyGeneticsLineage DifferentiationPluripotent Cells +5

Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription

Rui Xiao, Jiayu Chen, Zhengyu Liang, +18

Cell

Histone ModificationsChromatinTranscriptional RegulationSystems BiologyFunctional Genomics +12

Recurrently deregulated lncRNAs in hepatocellular carcinoma

Yang Yang, Lei Chen, Jin Gu, +21

Nature Communications

Characterization of stress‐responsive lnc<scp>RNA</scp>s in <i><scp>A</scp>rabidopsis thaliana</i> by integrating expression, epigenetic and structural features

Chao Di, Jiapei Yuan, Yue Wu, +8

The Plant Journal

GeneticsMolecular BiologyMolecular GeneticsGenomicsEpigenetics +17

Comparative analysis of the transcriptome across distant species

Mark Gerstein, Joel Rozowsky, Koon‐Kiu Yan, +93

Nature

CLIPdb: a CLIP-seq database for protein-RNA interactions

Yucheng Yang, Chao Di, Boqin Hu, +6

BMC Genomics

Diverse transcription factor binding features revealed by genome-wide ChIP-seq in <i>C. elegans</i>

Wei Niu, Zhi John Lu, Mei Zhong, +15

Genome Research

Critical roles of long noncoding RNAs in <i>Drosophila</i> spermatogenesis

Kejia Wen, Lijuan Yang, Tuanlin Xiong, +13

Genome Research