Matthew DeJongh

The RAST Server: Rapid Annotations using Subsystems Technology

Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.5K citations · Full text

KBase: The United States Department of Energy Systems Biology Knowledgebase

Adam P. Arkin, Robert W. Cottingham, Christopher S. Henry et al. · Nature Biotechnology · 2018 · 1.6K citations · Full text

High-throughput generation, optimization and analysis of genome-scale metabolic models

Christopher S. Henry, Matthew DeJongh, Aaron A. Best et al. · Nature Biotechnology · 2010 · 1.1K citations

Metabolic Network, Engineering, Computational Biology +7

The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes

Samuel M. D. Seaver, Filipe Liu, Qizhi Zhang et al. · Nucleic Acids Research · 2020 · 271 citations · Full text

Toward the automated generation of genome-scale metabolic networks in the SEED

Matthew DeJongh, Kevin Formsma, Paul Boillot et al. · BMC Bioinformatics · 2007 · 142 citations · Full text