Saber Hafezqorani

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

Francisco J. Pardo-Palacios, Dingjie Wang, Fairlie Reese et al. · Nature Methods · 2024 · 174 citations · Full text

Modeling the combined effect of RNA-binding proteins and microRNAs in post-transcriptional regulation

Saber Hafezqorani, Atefeh Lafzi, Ruben G. de Bruin et al. · Nucleic Acids Research · 2016 · 48 citations · Full text

Reference-free assembly of long-read transcriptome sequencing data with RNA-Bloom2

Ka Ming Nip, Saber Hafezqorani, Kristina Gagalova et al. · Nature Communications · 2023 · 44 citations · Full text

Reference-free Transcriptome Assembly, Genetics, Transcriptomics Technology +16

Trans-NanoSim characterizes and simulates nanopore RNA-sequencing data

Saber Hafezqorani, Chen Yang, Theodora Lo et al. · GigaScience · 2020 · 33 citations · Full text

Characterization and simulation of metagenomic nanopore sequencing data with Meta-NanoSim

Chen Yang, Theodora Lo, Ka Ming Nip et al. · GigaScience · 2023 · 19 citations · Full text