Olivia Holmes

Statistics

Publications

Citations

514

H-Index

Active since

2016

Affiliations

Chan Zuckerberg Initiative (United States)(Current)

University of California, Berkeley

Olivia Holmes is an author at Chan Zuckerberg Initiative (United States) specializing in genomics, metagenomic pathogen detection, and microbial community composition.

Publications per year

2016–2025

Publications

IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring

Katrina Kalantar, Tiago Rodrigues De Carvalho, Charles F. A. de Bourcy et al. · GigaScience · 2020 · 422 citations · Full text

Life Sciences, Bioinformatics, Microbiology +12

IDseq – An Open Source Cloud-based Pipeline and Analysis Service for Metagenomic Pathogen Detection and Monitoring

Katrina Kalantar, Tiago Rodrigues De Carvalho, Charles F. A. de Bourcy et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2020 · 41 citations · Full text

Life Sciences, Bioinformatics, Microbiology +15

Assessing and Improving the Identification of Computer-Generated Portraits

Olivia Holmes, Martin S. Banks, Hany Farid · ACM Transactions on Applied Perception · 2016 · 39 citations · Full text

Computing, Computer Science, Psychology +9

Simultaneous detection of pathogens and antimicrobial resistance genes with the open source, cloud-based, CZ ID platform

Dan Lu, Katrina Kalantar, Abigail Glascock et al. · Genome Medicine · 2025 · 12 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

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