Deniz Yaşar Öztaş

Dynamic Profiling of Binding and Allosteric Propensities of the SARS-CoV-2 Spike Protein with Different Classes of Antibodies: Mutational and Perturbation-Based Scanning Reveals the Allosteric Duality of Functionally Adaptable Hotspots

Gennady M. Verkhivker, Steve Agajanian, Deniz Yaşar Öztaş et al. · Journal of Chemical Theory and Computation · 2021 · 59 citations

Life Sciences, Biophysics, Molecular Biology +17

Allosteric Control of Structural Mimicry and Mutational Escape in the SARS-CoV-2 Spike Protein Complexes with the ACE2 Decoys and Miniprotein Inhibitors: A Network-Based Approach for Mutational Profiling of Binding and Signaling

Gennady M. Verkhivker, Steve Agajanian, Deniz Yaşar Öztaş et al. · Journal of Chemical Information and Modeling · 2021 · 30 citations

Life Sciences, Bioinformatics, Molecular Biology +17

Tracing Size and Surface Chemistry-Dependent Endosomal Uptake of Gold Nanoparticles Using Surface-Enhanced Raman Scattering

Deniz Yaşar Öztaş, Mine Altunbek, Deniz Uzunoğlu et al. · Langmuir · 2019 · 13 citations

Natural Sciences, Biochemistry, Biophysics +17

Computational analysis of protein stability and allosteric interaction networks in distinct conformational forms of the SARS-CoV-2 spike D614G mutant: reconciling functional mechanisms through allosteric model of spike regulation

Gennady M. Verkhivker, Steve Agajanian, Deniz Yaşar Öztaş et al. · Journal of Biomolecular Structure and Dynamics · 2021 · 13 citations · Full text

Natural Sciences, Biophysics, Molecular Biology +17

Silencing Breast Cancer Genes Using Morpholino Embedded DNA-Tile-AuNPs Nanostructures

Cansu Ümran Tunç, Deniz Yaşar Öztaş, Deniz Uzunoğlu et al. · Human Gene Therapy · 2019 · 12 citations

Life Sciences, Biotechnology, Molecular Biology +17