Long-read based de novo assembly of low-complexity metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system

Vincent Somerville, Stefanie Lutz, Michael Schmid, +5

BMC Microbiology

Snf2 controls pulcherriminic acid biosynthesis and antifungal activity of the biocontrol yeast <i>Metschnikowia pulcherrima</i>

Deborah Gore‐Lloyd, Inés Sumann, Alexander O. Brachmann, +13

Molecular Microbiology

Mutant StrainFungal DiversityBiosynthesisBiochemistryAntifungal Activity +13

Comparative Genomics of Completely Sequenced Lactobacillus helveticus Genomes Provides Insights into Strain-Specific Genes and Resolves Metagenomics Data Down to the Strain Level

Michael Schmid, Jonathan Muri, Damianos P. Melidis, +10

Frontiers in Microbiology

Petunia- and Arabidopsis-Specific Root Microbiota Responses to Phosphate Supplementation

Natacha Bodenhausen, Vincent Somerville, Alessandro Desirò, +4

Phytobiomes Journal

BiologyBiosynthesisEngineeringPlant-microbe InteractionMedicine +12

An integrated model system to gain mechanistic insights into biofilm-associated antimicrobial resistance in Pseudomonas aeruginosa MPAO1

Adithi R. Varadarajan, R N Allan, Jules D. P. Valentin, +11

npj Biofilms and Microbiomes

Functional strain redundancy and persistent phage infection in Swiss hard cheese starter cultures

Vincent Somerville, Hélène Berthoud, Remo S. Schmidt, +5

The ISME Journal

BacteriologyBacteriophageMicrobial EvolutionLactic Acid BacteriaFood Microbiology +16

Deep Divergence and Genomic Diversification of Gut Symbionts of Neotropical Stingless Bees

Garance Sarton-Lohéac, Carlos Gustavo Nunes-Silva, Florent Mazel, +11

mBio

Use and limitations of genome-scale metabolic models in food microbiology

Vincent Somerville, Pranas Grigaitis, J.A. Battjes, +2

Current Opinion in Food Science

Metabolic ModellingMicrobial MetabolismMetabolic ModelMetabolic NetworkBioenergetics +15

Extensive diversity and rapid turnover of phage defense repertoires in cheese-associated bacterial communities

Vincent Somerville, Thibault Schowing, Hélène Chabas, +4

Microbiome

DNA Methylation Patterns in the Round Goby Hypothalamus Support an On-The-Spot Decision Scenario for Territorial Behavior

Vincent Somerville, Michaela Schwaiger, Philipp Emanuel Hirsch, +5

Genes