Bart Hooghe

ORegAnno: an open-access community-driven resource for regulatory annotation

Obi L. Griffith, Stephen B. Montgomery, Bridget Bernier et al. · Nucleic Acids Research · 2007 · 240 citations · Full text

ConTra: a promoter alignment analysis tool for identification of transcription factor binding sites across species

Bart Hooghe, Paco Hulpiau, Frans van Roy et al. · Nucleic Acids Research · 2008 · 68 citations · Full text

ConTra v2: a tool to identify transcription factor binding sites across species, update 2011

Stefan Broos, Paco Hulpiau, Jeroen Galle et al. · Nucleic Acids Research · 2011 · 61 citations · Full text

A flexible integrative approach based on random forest improves prediction of transcription factor binding sites

Bart Hooghe, Stefan Broos, Frans van Roy et al. · Nucleic Acids Research · 2012 · 56 citations · Full text

Flexible Integrative Approach, Genetics, Molecular Biology +21

PhysBinder: improving the prediction of transcription factor binding sites by flexible inclusion of biophysical properties

Stefan Broos, Arne Soete, Bart Hooghe et al. · Nucleic Acids Research · 2013 · 32 citations · Full text