Ludvig Bergenstråhle

High-definition spatial transcriptomics for in situ tissue profiling

Sanja Vicković, Gökçen Eraslan, Fredrik Salmén et al. · Nature Methods · 2019 · 1.2K citations · Full text

Integrating spatial gene expression and breast tumour morphology via deep learning

Bryan He, Ludvig Bergenstråhle, Linnea Stenbeck et al. · Nature Biomedical Engineering · 2020 · 477 citations

Systems Biology, Engineering, Machine Learning +11

Single-cell and spatial transcriptomics enables probabilistic inference of cell type topography

Alma Andersson, Joseph Bergenstråhle, Michaela Asp et al. · Communications Biology · 2020 · 469 citations · Full text

Spatially resolved clonal copy number alterations in benign and malignant tissue

Andrew Erickson, Mengxiao He, Emelie Berglund et al. · Nature · 2022 · 293 citations · Full text

Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral entry and highlights inflammatory programs in putative target cells

Christoph Muus, Malte D. Luecken, Gökcen Eraslan et al. · 2020 · 264 citations · Full text

Inflammatory Lung Disease, Lung Inflammation, Immunology +16