Shinji Iida

Variation of free-energy landscape of the p53 C-terminal domain induced by acetylation: Enhanced conformational sampling

Shinji Iida, Tadaaki Mashimo, Takashi Kurosawa et al. · Journal of Computational Chemistry · 2016 · 30 citations · Full text

Biophysical Modeling, Molecular Biology, Analytical Ultracentrifugation +17

Multimodal Structural Distribution of the p53 C-Terminal Domain upon Binding to S100B via a Generalized Ensemble Method: From Disorder to Extradisorder

Shinji Iida, Takeshi Kawabata, Kota Kasahara et al. · Journal of Chemical Theory and Computation · 2019 · 20 citations

Engineering, Structural Bioinformatics, Biomolecular Structure Prediction +20

Fly casting with ligand sliding and orientational selection supporting complex formation of a GPCR and a middle sized flexible molecule

Junichi Higo, Kota Kasahara, Gert‐Jan Bekker et al. · Scientific Reports · 2022 · 15 citations · Full text

Structural Fluctuations of Aromatic Residues in an Apo-Form Reveal Cryptic Binding Sites: Implications for Fragment-Based Drug Design

Shinji Iida, Hironori Nakamura, Tadaaki Mashimo et al. · The Journal of Physical Chemistry B · 2020 · 12 citations

Drug Target, Biomolecular Structure Prediction, Fragment-based Drug Design +20

Continuum mechanical parameterisation of cytoplasmic dynein from atomistic simulation

Benjamin S. Hanson, Shinji Iida, Daniel J. Read et al. · Methods · 2020 · 11 citations

Engineering, Molecular Biology, Continuum Modeling +6