Integrative analysis of 111 reference human epigenomes

Anshul Kundaje, Wouter Meuleman, Jason Ernst, +91

Nature

BioinformaticsChromatinGenome-wide Association StudyMedicineGenetics +12

The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans

Kristin G. Ardlie, David S. DeLuca, Ayellet V. Segrè, +136

Science

Mapping and analysis of chromatin state dynamics in nine human cell types

Jason Ernst, Pouya Kheradpour, Tarjei S. Mikkelsen, +11

Nature

ChromatinHuman Cell TypesChromatin RemodelingNatural SciencesEpigenetic Change +9

An integrated encyclopedia of DNA elements in the human genome

Ian Dunham, Anshul Kundaje, Shelley Force Aldred, +440

The Journal of the American Medical Association (JAMA) Network (American Medical Association)

Histone modifications at human enhancers reflect global cell-type-specific gene expression

Nathaniel D. Heintzman, Gary C. Hon, R. David Hawkins, +18

Nature

Histone ModificationsChromatinChromatin StructureChromatin RemodelingNatural Sciences +9

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, +530

Nature

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Stephen G. Landt, Georgi K. Marinov, Anshul Kundaje, +44

Genome Research

Histone ModificationsEngineeringElectronic Design AutomationGeneticsComputer Architecture +24

Identification of Functional Elements and Regulatory Circuits by <i>Drosophila</i> modENCODE

Sushmita Roy, Jason Ernst, Peter V. Kharchenko, +168

Science

A high-resolution map of human evolutionary constraint using 29 mammals

Kerstin Lindblad‐Toh, Manuel Garber, Or Zuk, +57

Nature

Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures

Alexander Stark, Michael F. Lin, Pouya Kheradpour, +9

Nature

BiologyFunctional GenomicsDrosophila GenomesGeneticsComputational Biology +8