Annalisa Bordogna

Predicting the accuracy of protein–ligand docking on homology models

Annalisa Bordogna, Alessandro Pandini, Laura Bonati · Journal of Computational Chemistry · 2010 · 111 citations

Homology Models, Engineering, Biomolecular Structure Prediction +13

New Aryl Hydrocarbon Receptor Homology Model Targeted To Improve Docking Reliability

Ilaria Motto, Annalisa Bordogna, Anatoly A. Soshilov et al. · Journal of Chemical Information and Modeling · 2011 · 82 citations · Full text

Engineering, Biomolecular Structure Prediction, Molecular Biology +20

Defining the limits of homology modeling in information‐driven protein docking

João Rodrigues, Adrien S. J. Melquiond, Ezgi Karaca et al. · Proteins Structure Function and Bioinformatics · 2013 · 67 citations · Full text

Protein Universe, Engineering, Interactomics +15

Strengths and weaknesses of data‐driven docking in critical assessment of prediction of interactions

Sjoerd J. de Vries, Adrien S. J. Melquiond, Panagiotis L. Kastritis et al. · Proteins Structure Function and Bioinformatics · 2010 · 41 citations · Full text

Detecting similarities among distant homologous proteins by comparison of domain flexibilities

Alessandro Pandini, Giancarlo Mauri, Annalisa Bordogna et al. · Protein Engineering Design and Selection · 2007 · 20 citations · Full text

Structural Bioinformatics, Distant Homologous Proteins, Molecular Biology +17