Multiple High-Throughput Analyses Monitor the Response of <i>E. coli</i> to Perturbations

Nobuyoshi Ishii, Kenji Nakahigashi, Tomoya Baba, +26

Science

EngineeringMetabolic NetworksMetabolic ModelHigh Throughput SequencingMetabolic Network +20

Systematic phenome analysis of <i>Escherichia coli</i> multiple‐knockout mutants reveals hidden reactions in central carbon metabolism

Kenji Nakahigashi, Yoshihiro Toya, Nobuyoshi Ishii, +7

Molecular Systems Biology

¹³C‐metabolic flux analysis for batch culture of <i>Escherichia coli</i> and its <i>pyk</i> and <i>pgi</i> gene knockout mutants based on mass isotopomer distribution of intracellular metabolites

Yoshihiro Toya, Nobuyoshi Ishii, Kenji Nakahigashi, +4

Biotechnology Progress

Glucose ExhaustionMolecular BiologyMicrobial PhysiologyMetabolic ModelMetabolic Network +17

High-yielding rice Takanari has superior photosynthetic response to a commercial rice Koshihikari under fluctuating light

Shunsuke Adachi, Yu Tanaka, Atsuko Miyagi, +10

Journal of Experimental Botany

Combinatorial deletions of glgC and phaCE enhance ethanol production in Synechocystis sp. PCC 6803

Katsunori Namakoshi, Tubasa Nakajima, Katsunori Yoshikawa, +2

Journal of Biotechnology

Synechocystis SpBiosynthesisEngineeringBioenergyBiochemistry +6

Direct measurement of isotopomer of intracellular metabolites using capillary electrophoresis time-of-flight mass spectrometry for efficient metabolic flux analysis

Yoshihiro Toya, Nobuyoshi Ishii, Takashi Hirasawa, +7

Journal of Chromatography A

BiochemistryBioanalysisPhysiologyMass SpectrometryMetabolomic Profiling +10

Optogenetic switch for controlling the central metabolic flux of Escherichia coli

Sebastian T. Tandar, Sachie Senoo, Yoshihiro Toya, +1

Metabolic Engineering

EngineeringBiochemistryBioenergeticsBiotechnologySynthetic Biology +10

Metabolic engineering of Synechocystis sp. PCC 6803 for enhanced ethanol production based on flux balance analysis

Katsunori Yoshikawa, Yoshihiro Toya, Hiroshi Shimizu

Bioprocess and Biosystems Engineering

Synechocystis SpBiomass ConversionBiomanufacturingBioenergyBiochemistry +8

13C-metabolic flux analysis for mevalonate-producing strain of Escherichia coli

Keisuke Wada, Yoshihiro Toya, Satomi Banno, +3

Journal of Bioscience and Bioengineering

Metabolic ModelMicrobiologyEscherichia ColiMetabolic Engineering

Identification of alcohol stress tolerance genes of Synechocystis sp. PCC 6803 using adaptive laboratory evolution

Takuya Matsusako, Yoshihiro Toya, Katsunori Yoshikawa, +1

Biotechnology for Biofuels