Jia‐Ming Chang

T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension

Paolo Di Tommaso, Sébastien Moretti, Ioannis Xénarios et al. · Nucleic Acids Research · 2011 · 1.2K citations · Full text

Life Sciences, Bioinformatics, Biology +14

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

Naihui Zhou, Yuxiang Jiang, Timothy Bergquist et al. · Genome biology · 2019 · 482 citations · Full text

Life Sciences, Bioinformatics, Biology +17

TADs are 3D structural units of higher-order chromosome organization in <i>Drosophila</i>

Quentin Szabo, Daniel Jost, Jia‐Ming Chang et al. · Science Advances · 2018 · 298 citations · Full text

Life Sciences, Genetics, Molecular Biology +14

Polycomb-Dependent Chromatin Looping Contributes to Gene Silencing during Drosophila Development

Yuki Ogiyama, Bernd Schuettengruber, Giorgio L. Papadopoulos et al. · Molecular Cell · 2018 · 263 citations · Full text

Life Sciences, Developmental Biology, Genetics +16

TCS: A New Multiple Sequence Alignment Reliability Measure to Estimate Alignment Accuracy and Improve Phylogenetic Tree Reconstruction

Jia‐Ming Chang, Paolo Di Tommaso, Cédric Notredame · Molecular Biology and Evolution · 2014 · 227 citations · Full text

Life Sciences, Bioinformatics, Biology +17