pymzML—Python module for high-throughput bioinformatics on mass spectrometry data

Till Bald, Johannes Barth, Anna Niehues, +3

Bioinformatics

Reassessment of chitosanase substrate specificities and classification

Tobias Weikert, Anna Niehues, Stefan Cord‐Landwehr, +2

Nature Communications

Biotechnologically produced chitosans with nonrandom acetylation patterns differ from conventional chitosans in properties and activities

Sruthi Sreekumar, Jasper Wattjes, Anna Niehues, +5

Nature Communications

Enzymatic Production and Enzymatic-Mass Spectrometric Fingerprinting Analysis of Chitosan Polymers with Different Nonrandom Patterns of Acetylation

Jasper Wattjes, Anna Niehues, Stefan Cord‐Landwehr, +4

Journal of the American Chemical Society

Quantitative Mass-Spectrometric Sequencing of Chitosan Oligomers Revealing Cleavage Sites of Chitosan Hydrolases

Stefan Cord‐Landwehr, Phillip Ihmor, Anna Niehues, +3

Analytical Chemistry

The Metabolic Status Drives Acclimation of Iron Deficiency Responses in Chlamydomonas reinhardtii as Revealed by Proteomics Based Hierarchical Clustering and Reverse Genetics

Ricarda Höhner, Johannes Barth, Leonardo Magneschi, +6

Molecular & Cellular Proteomics

PhotorespirationReverse GeneticsIron MetabolismGeneticsPhotosynthesis Dependent Growth +22

Chitinosanase: A fungal chitosan hydrolyzing enzyme with a new and unusually specific cleavage pattern

Markus Kohlhoff, Anna Niehues, Jasper Wattjes, +6

Carbohydrate Polymers

Fungal ChitosanBiotransformationBiochemistryNatural SciencesSpecific Cleavage Pattern +4

Ten quick tips for building FAIR workflows

Casper de Visser, Lennart Johansson, Purva Kulkarni, +8

PLoS Computational Biology

Software MaintenanceEngineeringSoftware EngineeringSemantic WebSoftware Analysis +21

The Interplay of Light and Oxygen in the Reactive Oxygen Stress Response of Chlamydomonas reinhardtii Dissected by Quantitative Mass Spectrometry

Johannes Barth, Sonja Verena Bergner, Daniel Jaeger, +4

Molecular & Cellular Proteomics

Environmental SignalingPhotobiologyMolecular BiologyCyanobacteriaReactive Oxygen Species +19

The non-sulfated ulvanobiuronic acid of ulvans is the smallest active unit able to induce an oxidative burst in dicot cells

Roberta Paulert, Fabrice Brunel, Rebecca L. J. Melcher, +4

Carbohydrate Polymers

Smallest Active UnitNon-sulfated Ulvanobiuronic AcidBiochemistryMedicineLipid Peroxidation +7