Comparative transcriptomics of three Poaceae species reveals patterns of gene expression evolution

Rebecca M. Davidson, Malali Gowda, Gaurav D. Moghe, +5

The Plant Journal

Plant GeneticsBotanyGeneticsPoaceae FamilyPoaceae Subgroups +15

Utility of RNA Sequencing for Analysis of Maize Reproductive Transcriptomes

Rebecca M. Davidson, Candice N. Hansey, Malali Gowda, +8

The Plant Genome

Plant GeneticsGeneticsTranscriptomics TechnologyGenomicsPlant Genomics +15

Robust-LongSAGE (RL-SAGE): A Substantially Improved LongSAGE Method for Gene Discovery and Transcriptome Analysis 

Malali Gowda, Chatchawan Jantasuriyarat, Ralph A. Dean, +1

PLANT PHYSIOLOGY

Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties

Atul Kumar Upadhyay, Anita R. Chacko, A. Gandhimathi, +27

BMC Plant Biology

Indica rice genome assembly, annotation and mining of blast disease resistance genes

H. B. Mahesh, Meghana Deepak Shirke, Siddarth Singh, +4

BMC Genomics

Multi-Omics Driven Assembly and Annotation of the Sandalwood (<i>Santalum album</i>) Genome

H. B. Mahesh, Pratigya Subba, Jayshree Advani, +8

PLANT PHYSIOLOGY

Deep and comparative analysis of the mycelium and appressorium transcriptomes of Magnaporthe grisea using MPSS, RL-SAGE, and oligoarray methods

Malali Gowda, R C Venu, Mohan B. Raghupathy, +10

BMC Genomics

Robust analysis of 5′-transcript ends (5′-RATE): a novel technique for transcriptome analysis and genome annotation

Malali Gowda, Haumeng Li, Joe Alessi, +3

Nucleic Acids Research

Identification of a major blast resistance gene in the rice cultivar ‘Tetep’

Subhankar Roy Barman, Malali Gowda, R C Venu, +1

Plant Breeding

BiologyPlant GeneticsQuantitative GeneticsGeneticsCrop Protection +13

Comprehensive analyses of genomes, transcriptomes and metabolites of neem tree

Nagesh Kuravadi, Vijay Yenagi, Kannan Rangiah, +10

PeerJ

Neem SeedBotanyGeneticsPlant PathologyNeem Tree +15