Jared Adolf‐Bryfogle

Author

Fox Chase Cancer Center ORCID

Also Known As

Adolf-Bryfogle, Jared, Jared Adolf-Bryfogle, Jared Adolf-Bryfogle (431729), Jared Adolf‐Bryfogle, Watkins, Andrew M.

Publications

2.2K

Citations

H-Index

Concepts

All Affiliations

Fox Chase Cancer Center Institute for Protein Innovation Johns Hopkins University Scripps Research Institute Boston Children's Hospital

About

Jared Adolf‐Bryfogle is an author at Fox Chase Cancer Center specializing in medicine, molecular biology, and computational biology.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Medicine	7	7	656
2	Natural Sciences	4	4	231
3	Engineering	3	3	184
4	Biochemistry	2	2	58
5	Management	1	1	32

Jared Adolf‐Bryfogle

Publications

1.2K

Citations

H-Index

Page 1

	Year	Citations
Modeling and docking of antibody structures with Rosetta Brian D. Weitzner, Jeliazko R. Jeliazkov, Sergey Lyskov, Nature Protocols Protein FoldingMedicineAntibody EngineeringAntibody StructuresAntibody Screening	2017	273
RosettaAntibodyDesign (RAbD): A general framework for computational antibody design Jared Adolf‐Bryfogle, Oleksandr Kalyuzhniy, Michael Kubitz, PLoS Computational Biology	2018	219
Automatically Fixing Errors in Glycoprotein Structures with Rosetta Brandon Frenz, Sebastian Rämisch, Andrew J. Borst, Structure Glycoprotein StructuresNatural SciencesGlycobiologyMolecular BiologyProtein Modeling	2018	127
PyIgClassify: a database of antibody CDR structural classifications Jared Adolf‐Bryfogle, Qifang Xu, Benjamin North, Nucleic Acids Research EngineeringImmunologyMolecular BiologyBioinformatics DatabaseCdr Structures	2014	126
CoV3D: a database of high resolution coronavirus protein structures Ragul Gowthaman, Johnathan D. Guest, Rui Yin, Nucleic Acids Research	2020	80
Residue‐centric modeling and design of saccharide and glycoconjugate structures Jason W. Labonte, Jared Adolf‐Bryfogle, William R. Schief, Journal of Computational Chemistry	2016	56
Kinase-Mediated Changes in Nucleosome Conformation Trigger Chromatin Decondensation via Poly(ADP-Ribosyl)ation Colin Thomas, Elena Kotova, Mark Andrake, Molecular Cell ChromatinChromatin StructureChromatin RemodelingNatural SciencesMolecular Biology	2014	45
Hiding in plain sight: structure and sequence analysis reveals the importance of the antibody DE loop for antibody-antigen binding Simon Kelow, Jared Adolf‐Bryfogle, Roland L. Dunbrack mAbs Immunocytochemical TechniqueAntibody-antigen BindingImmunologyMolecular BiologyImmunodominance	2020	33
The PyRosetta Toolkit: A Graphical User Interface for the Rosetta Software Suite Jared Adolf‐Bryfogle, Roland L. Dunbrack PLoS ONE EngineeringVisual Programming LanguageInteractive ComputingGraphical User InterfaceMolecular Biology	2013	32
Nucleic acid delivery of immune-focused SARS-CoV-2 nanoparticles drives rapid and potent immunogenicity capable of single-dose protection Kylie M. Konrath, Kevin Liaw, Yuanhan Wu, Cell Reports	2022	28

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