Siu Hung Joshua Chan

Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0

Laurent Heirendt, Sylvain Arreckx, Thomas Pfau et al. · Nature Protocols · 2019 · 1.3K citations · Full text

Metabolic Network, Engineering, Biochemistry +12

SteadyCom: Predicting microbial abundances while ensuring community stability

Siu Hung Joshua Chan, Margaret Simons, Costas D. Maranas · PLoS Computational Biology · 2017 · 232 citations · Full text

Genome-scale Metabolic Modeling, Engineering, Synthetic Ecology +16

Bacterial colonization reprograms the neonatal gut metabolome

Kyle Bittinger, Chunyu Zhao, Yun Li et al. · Nature Microbiology · 2020 · 125 citations · Full text

Dysbiosis, Bacterial Colonization, Microbiota +6

Farnesoid X Receptor Signaling Shapes the Gut Microbiota and Controls Hepatic Lipid Metabolism

Limin Zhang, Cen Xie, Robert G. Nichols et al. · mSystems · 2016 · 118 citations · Full text

Standardizing biomass reactions and ensuring complete mass balance in genome-scale metabolic models

Siu Hung Joshua Chan, Jingyi Cai, Lin Wang et al. · Bioinformatics · 2017 · 116 citations · Full text