Samuel T. Westreich

PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions

Nathan D. Olson, Justin Wagner, Jennifer McDaniel et al. · Cell Genomics · 2022 · 204 citations · Full text

Life Sciences, Bioinformatics, Genetics +17

SAMSA2: a standalone metatranscriptome analysis pipeline

Samuel T. Westreich, Michelle L. Treiber, David A. Mills et al. · BMC Bioinformatics · 2018 · 182 citations · Full text

Life Sciences, Bioinformatics, Microbiology +11

precisionFDA Truth Challenge V2: Calling variants from short- and long-reads in difficult-to-map regions

Nathan D. Olson, Justin Wagner, Jennifer McDaniel et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2020 · 67 citations · Full text

Life Sciences, Bioinformatics, Genetics +17

SAMSA: a comprehensive metatranscriptome analysis pipeline

Samuel T. Westreich, Ian Korf, David A. Mills et al. · BMC Bioinformatics · 2016 · 58 citations · Full text

Life Sciences, Bioinformatics, Microbiology +14

Fecal metatranscriptomics of macaques with idiopathic chronic diarrhea reveals altered mucin degradation and fucose utilization

Samuel T. Westreich, Amir Ardeshir, Zeynep Alkan et al. · Microbiome · 2019 · 45 citations · Full text

Life Sciences, Microbiology, Veterinary Microbiology +17