Two gap-free reference genomes and a global view of the centromere architecture in rice

Jia‐Ming Song, Wen‐Zhao Xie, Shuo Wang, +22

Molecular Plant

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Influenza infection elicits an expansion of gut population of endogenous Bifidobacterium animalis which protects mice against infection

Qiang Zhang, Hu Jin, Jia‐Wu Feng, +15

Genome biology

A multi-omics integrative network map of maize

Linqian Han, Wanshun Zhong, Jia Qian, +32

Nature Genetics

Plant GeneticsPrecision AgricultureBotanyGeneticsOmics +4

Structural variation in the pangenome of wild and domesticated barley

Murukarthick Jayakodi, Qiongxian Lu, Hélène Pidon, +77

Nature

Analysis of Rice Transcriptome Reveals the LncRNA/CircRNA Regulation in Tissue Development

Run Zhou, Pablo Sanz-Jimenez, Xi-Tong Zhu, +4

Rice

Shrinkage-based similarity metric for cluster analysis of microarray data

Vera Cherepinsky, Jia‐Wu Feng, Marc Rejali, +1

Proceedings of the National Academy of Sciences

Comparative analysis of miniature inverted–repeat transposable elements (MITEs) and long terminal repeat (LTR) retrotransposons in six Citrus species

Yan Liu, Muhammad Tahir ul Qamar, Jia‐Wu Feng, +6

BMC Plant Biology

Ribosome profiling reveals the translational landscape and allele-specific translational efficiency in rice

Xi-Tong Zhu, Run Zhou, Jian Che, +6

Plant Communications

Plant GeneticsGeneticsMolecular BiologyMolecular GeneticsGenomics +15

Evolution Analyses of CAMTA Transcription Factor in Plants and Its Enhancing Effect on Cold-tolerance

Peixuan Xiao, Jia‐Wu Feng, Xi-Tong Zhu, +1

Frontiers in Plant Science

Enhancing EffectBotanyGeneticsMolecular GeneticsPhylogenetic Analysis +15

Phasing analysis of the transcriptome and epigenome in a rice hybrid reveals the inheritance and difference in DNA methylation and allelic transcription regulation

Jia‐Wu Feng, Yue Lu, Lin Shao, +3

Plant Communications