COVID-19 cough classification using machine learning and global smartphone recordings

Madhurananda Pahar, Marisa Klopper, Robin M. Warren, +1

Computers in Biology and Medicine

Health InformaticsMachine LearningGlobal HealthCovid-19 PandemicDigital Health +6

Emergence and Spread of Extensively and Totally Drug-Resistant Tuberculosis, South Africa

Marisa Klopper, Robin M. Warren, Cindy Hayes, +10

Emerging infectious diseases

Tuberculosis PreventionGenetic EpidemiologyMdr TbDrug ResistanceSouth Africa +21

Emergence and Spread of Extensively and Totally Drug-Resistant Tuberculosis, South Africa

Marisa Klopper, Robin M. Warren, Cindy Hayes, +10

Emerging infectious diseases

Epistasis between antibiotic resistance mutations drives the evolution of extensively drug-resistant tuberculosis

Sònia Borrell, Youjin Teo, Federica Giardina, +6

Evolution Medicine and Public Health

Detection of tuberculosis by automatic cough sound analysis

Gert Hendrik Renier Botha, Grant Theron, Robin M. Warren, +4

Physiological Measurement

COVID-19 detection in cough, breath and speech using deep transfer learning and bottleneck features

Madhurananda Pahar, Marisa Klopper, Robin M. Warren, +1

Computers in Biology and Medicine

Deep Transfer LearningBottleneck FeaturesRespiratory InfectionCovid-19 DetectionInfectious Respiratory Disease +3

Geospatial distribution of Mycobacterium tuberculosis genotypes in Africa

Violet Chihota, Antoinette Niehaus, Elizabeth M. Streicher, +14

PLoS ONE

MDR M. tuberculosis outbreak clone in Eswatini missed by Xpert has elevated bedaquiline resistance dated to the pre-treatment era

Patrick Beckert, Elisabeth Sánchez-Padilla, Matthias Merker, +20

Genome Medicine

The Rationale for Using Rifabutin in the Treatment of MDR and XDR Tuberculosis Outbreaks

Frederick A. Sirgel, Robin M. Warren, Erik C. Böttger, +3

PLoS ONE

Molecular-based Drug SusceptibilityTuberculosis PreventionPharmacotherapyAntimicrobial ChemotherapyAntibiotic Resistance +20

Programmatically Selected Multidrug-Resistant Strains Drive the Emergence of Extensively Drug-Resistant Tuberculosis in South Africa

Borna Müller, Violet Chihota, Manormoney Pillay, +11

PLoS ONE