Concepedia
Protist · 2015 · 28 citations · 34 references
BiologyPhylogeneticsMolecular EcologyMarine IsolatesNatural SciencesMarine GenomicsEvolutionary BiologyPlesiomorphic Deep-branching LineageMarine BiodiversityMicrobiologyMarine BiologyTrimastix Marina FormMedicineMarine BiotaPhylogenetic Analysis
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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
Julie Thompson, Desmond G. Higgins, Toby J. Gibson · Nucleic Acids Research · 1994 · 64.4K citations · Full text
BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT
T. A. Hall · Nucleic Acids Symposium Series · 1999 · 38.7K citations
Bioinformatics, Engineering, Bioinformatics Database +13
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
Fredrik Ronquist, Maxim Teslenko, Paul van der Mark et al. · Systematic Biology · 2012 · 26.9K citations · Full text
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
Kazutaka Katoh · Nucleic Acids Research · 2002 · 17K citations · Full text
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis · Bioinformatics · 2006 · 15.7K citations · Full text