Physical Review B · 2007 · 328 citations · 19 references
Natural SciencesChemistryPhysicsComputational ChemistryMolecular PhysicsPhysical ChemistryAb Initio MethodsDensity Functional TheoryGraphene NanomaterialsIntermolecular ForcesMolecular Orbital TheoryNucleobase ChemistryDensity Functional Perturbation TheoryGrapheneGraphene OxideMøller - Plesset Perturbation TheoryMøller-plesset Perturbation TheoryNucleobase AromaticityNucleobase Stacking InteractionsPolarizability Effects
We report the results of our first-principles investigation on the interaction of the nucleobases adenine (A), cytosine (C), guanine (G), thymine (T), and uracil (U) with graphene, carried out within the density-functional theory framework, with additional calculations utilizing Hartree-Fock plus second-order M\o{}ller-Plesset perturbation theory. The calculated binding energy of the nucleobases shows the following hierarchy: $\mathrm{G}>\mathrm{A}\ensuremath{\approx}\mathrm{T}\ensuremath{\approx}\mathrm{C}>\mathrm{U}$, with the equilibrium configuration being rather similar for all five of them. Our results clearly demonstrate that the nucleobases exhibit significantly different interaction strengths when physisorbed on graphene. The stabilizing factor in the interaction between the base molecule and graphene sheet is dominated by the molecular polarizability that allows a weakly attractive dispersion force to be induced between them. The present study represents a significant step toward a first-principles understanding of how the base sequence of DNA can affect its interaction with carbon nanotubes, as observed experimentally.
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Self-Consistent Equations Including Exchange and Correlation Effects
W. Kohn, L. J. Sham · Physical Review · 1965 · 63.2K citations · Full text