Molecular Phylogenetics and Evolution · 2015 · 140 citations · 59 references
BiologyPhylogeneticsBotanyMolecular EcologyNatural SciencesEvolutionary BiologyAllopolyploid Gossypium LPlant TaxonomyPhylogeny ComparisonPlant PhylogenyPhylogenetic Analysis
59
R: A Language and Environment for Statistical Computing
R Core Team · 2000 · 352.8K citations · Full text
MrBayes 3: Bayesian phylogenetic inference under mixed models
Fredrik Ronquist, John P. Huelsenbeck · Bioinformatics · 2003 · 29.1K citations · Full text
Clustal W and Clustal X version 2.0
Mark Larkin, Gordon Blackshields, Nigel P. Brown et al. · Bioinformatics · 2007 · 28.7K citations · Full text
APE: Analyses of Phylogenetics and Evolution in R language
Emmanuel Paradis, Julien Claude, Korbinian Strimmer · Bioinformatics · 2004 · 12.3K citations · Full text