Nucleic Acids Research · 2024 · 125 citations · 23 references
Over the past 20 years, the Immune Epitope Database (IEDB, iedb.org) has established itself as the foremost resource for immune epitope data. The IEDB catalogs published epitopes and their contextual experimental data in a freely searchable public resource. The IEDB team manually curates data from the literature into a structured format and spans infectious, allergic, autoimmune, and transplant diseases. Here, we describe the enhancements made since our 2018 paper, capturing user-directed updates to the search interface, advanced data exports, increases in data quality, and improved interoperability across related resources. As we look forward to the next 20 years, we are confident in our ability to meet the needs of our users and to contribute to the broader field of data standardization.
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Helen M. Berman · Nucleic Acids Research · 2000 · 38.9K citations
Biological Database, Biochemistry, Structural Bioinformatics +12
The FAIR Guiding Principles for scientific data management and stewardship
Mark D. Wilkinson, Michel Dumontier, IJsbrand Jan Aalbersberg et al. · Scientific Data · 2016 · 16.6K citations · Full text
UniProt: the Universal Protein Knowledgebase in 2023
Alex Bateman, María Martin, Sandra Orchard et al. · Nucleic Acids Research · 2022 · 6.5K citations · Full text
The Immune Epitope Database (IEDB): 2018 update
Randi Vita, Swapnil Mahajan, James A. Overton et al. · Nucleic Acids Research · 2018 · 2.2K citations · Full text
Mihály Váradi, Damian Bertoni, Paulyna Magaña et al. · Nucleic Acids Research · 2023 · 1.6K citations · Full text
Engineering, Structural Bioinformatics, Biomolecular Structure Prediction +23