bioRxiv (Cold Spring Harbor Laboratory) · 2024 · 23 citations · 40 references
ComputingComputer ScienceData ScienceArtificial IntelligenceData EthicsMachine LearningArtificial Intelligence GovernanceArtificial Intelligence PolicyDeep LearningEthics Of Automated Decision-makingExplainable Machine LearningAi Impact AssessmentBiomedical ApplicationsBiomedical Data IntegrationData StandardsExplainable Artificial IntelligenceHuman-centered Explainable Artificial IntelligenceMachine Learning EthicsMachine Learning For Healthcare
Abstract Biomedical research is rapidly adopting artificial intelligence (AI). Yet the inherent complexity of biomedical data preparation requires implementing actionable, robust criteria for ethical and explainable AI (XAI) at the “pre-model” stage, encompassing data acquisition, detailed transformations, and ethical governance. Simple conformance to FAIR (Findable, Accessible, Interoperable, Reusable) Principles is insufficient. Here, we define criteria and practices for reliable AI-readiness of biomedical data, developed by the NIH Bridge to Artificial Intelligence (Bridge2AI) Standards Working Group across seven core dimensions of dataset AI-readiness: FAIRness, Provenance, Characterization, Ethics, Pre-model Explainability, Sustainability, and Computability . Conformance to these criteria provides a basis for pre-model scientific rigor and ethical integrity, mitigating downstream risks of bias and error prior to AI modeling. We apply and evaluate these standards across all four Bridge2AI flagship datasets, spanning functional genomics to clinical medicine, and encode them in machine-actionable metadata bound to the datasets. This framework sets a benchmark for preparing ethical, reusable datasets in biomedical AI and provides standardized methods for reliable pre-model data evaluation.
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The FAIR Guiding Principles for scientific data management and stewardship
Mark D. Wilkinson, Michel Dumontier, IJsbrand Jan Aalbersberg et al. · Scientific Data · 2016 · 17.8K citations · Full text
A Unified Approach to Interpreting Model Predictions
Scott Lundberg, Su‐In Lee · arXiv (Cornell University) · 2017 · 7.6K citations · Full text