Limnology and Oceanography Letters · 2024 · 27 citations · 51 references
Life SciencesMicrobiologyOceanographyMarine EcologyMarine MicrobiologyMicrobial EcologyMicrobial Community DynamicsMicrobial DiversificationMicrobial DiversityMicrobial OceanographyPolar Marine EcologyPolar Marine MicrobiologyHypervariable Region AnalysisMarine Bacterial DiversityMarine Microbial Community StructureMicrobial Community DiversityMicrobial Diversity AnalysisMicrobial RichnessPolar Microbial EcologyPolar Ocean Microbial Ecology
Abstract Understanding the patterns of marine microbial diversity (Bacteria + Archaea) is essential, as variations in their alpha‐ and beta‐diversities can affect ecological processes. Investigations of microbial diversity from global oceanographic expeditions and basin‐wide transects show positive correlations between microbial diversity and either temperature or productivity, but these studies rarely captured seasonality, especially in polar regions. Here, using multiannual alpha‐diversity data from eight time series in the northern and southern hemispheres, we show that marine microbial community richness and evenness generally correlate more strongly with daylength than with temperature or chlorophyll a (a proxy for photosynthetic biomass). This pattern is observable across time series found in the northern and southern hemispheres regardless of collection method, DNA extraction protocols, targeted 16S rRNA hypervariable region, sequencing technology, or bioinformatics pipeline.
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Hadley Wickham, Mara Averick, Jennifer Bryan et al. · The Journal of Open Source Software · 2019 · 21.6K citations · Full text
16S ribosomal DNA amplification for phylogenetic study
W G Weisburg, Susan M. Barns, Dale A. Pelletier et al. · Journal of Bacteriology · 1991 · 11.8K citations · Full text
Trevor Hastie, Robert Tibshirani · Statistical Science · 1986 · 3.4K citations