MycoKeys · 2024 · 12 citations · 53 references
Life SciencesBotanyPlant SciencesPlant GeneticsPlant Molecular BiologyPlant-microbe InteractionsPathogen IsolationPlant PhylogenyPlant-pathogenic FungiAgro-morphological CharacterizationBlight SymptomsInternal Transcribed Spacer (Its) ClusteringInternal Transcribed Spacer SequencingLeaf Spot DiseasesLeaf Spot SymptomsMorphological PhylogenyMulti-locus Phylogenetics
Sunflower ( Helianthus annuus L.) is a widely cultivated, fast-growing crop known for its seeds and oil, with substantial ecological and economic importance globally. However, it faces challenges from leaf diseases caused by Alternaria species, which threaten its yield. Three small-spored Alternaria species were isolated from leaf spot and blight symptoms on sunflower in Myanmar. All the species were determined based on morphological characterization and a multi-locus phylogenetic assessment of seven genes, including the internal transcribed spacer of rDNA region (ITS), glyceraldehyde-3-phosphate dehydrogenase ( GAPDH ), RNA polymerase second largest subunit (RPB2), translation elongation factor 1-α ( TEF1 ), Alternaria major allergen gene ( Alt a 1 ), endopolygalacturonase gene ( EndoPG ), and an anonymous gene region (OPA10-2). The results introduced two new Alternaria species, A. myanmarensis sp. nov. and A. yamethinensis sp. nov. , and a known species of A. burnsii , firstly reported from sunflower.
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MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura, Glen Stecher, Daniel S. Peterson et al. · Molecular Biology and Evolution · 2013 · 47.9K citations · Full text
Clustal W and Clustal X version 2.0
Mark Larkin, Gordon Blackshields, Nigel P. Brown et al. · Bioinformatics · 2007 · 29.1K citations · Full text