Response mechanism of Cynodon dactylon to flooding stress based on integrating metabonomics and transcriptomics analysis

Gene Ontology: tool for the unification of biology

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KEGG: Kyoto Encyclopedia of Genes and Genomes

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RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Bo Li, Colin N. Dewey · BMC Bioinformatics · 2011 · 23.4K citations · Full text

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Cole Trapnell, Brian A. Williams, Geo Pertea et al. · Nature Biotechnology · 2010 · 16.5K citations

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