Science Advances · 2023 · 15 citations · 53 references
Life SciencesNeurobiologyNeuroscienceGlial BiologyMolecular NeurobiologyMolecular NeuroscienceAstrocyte BiologyBlood-brain Barrier BiologyBlood-brain Barrier PenetrationExtracellular MatrixNeuroinflammationSecretome AnalysisAstrocyte-neuron InteractionsBlood-brain Barrier PermeabilityCell - Matrix InteractionsCell-extracellular Matrix InteractionsCell-matrix InteractionsMass Spectrometry-based Secretome AnalysisMatrix-cell InteractionsVascular Cell Adhesion Molecule 1
The gelatinases, matrix metalloproteinase 2 (MMP-2) and MMP-9, are key for leukocyte penetration of the brain parenchymal border in neuroinflammation and the functional integrity of this barrier; however, it is unclear which MMP substrates are involved. Using a tailored, sensitive, label-free mass spectrometry-based secretome approach, not previously applied to nonimmune cells, we identified 119 MMP-9 and 21 MMP-2 potential substrates at the cell surface of primary astrocytes, including known substrates (β-dystroglycan) and a broad spectrum of previously unknown MMP-dependent events involved in cell-cell and cell-matrix interactions. Using neuroinflammation as a model of assessing compromised astroglial barrier function, a selection of the potential MMP substrates were confirmed in vivo and verified in human samples, including vascular cell adhesion molecule-1 and neuronal cell adhesion molecule. We provide a unique resource of potential MMP-2/MMP-9 substrates specific for the astroglia barrier. Our data support a role for the gelatinases in the formation and maintenance of this barrier but also in astrocyte-neuron interactions.
53
The Perseus computational platform for comprehensive analysis of (prote)omics data
Stefka Tyanova, Tikira Temu, Pavel Sinitcyn et al. · Nature Methods · 2016 · 8.9K citations
Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment
Jürgen Cox, Nadin Neuhauser, Annette Michalski et al. · Journal of Proteome Research · 2011 · 5.9K citations · Full text
Jürgen Cox, Marco Y. Hein, Christian A. Luber et al. · Molecular & Cellular Proteomics · 2014 · 5.5K citations · Full text