Microbiology Spectrum · 2023 · 41 citations · 35 references
Life SciencesBioinformaticsMicrobiologyBacteriologyGenomicsMicrobial GeneticsBacterial EpidemiologyBacterial PathogenesisGenomic EpidemiologyMolecular TypingPathogen GenomicsPhylogenetic EpidemiologyBacterial Population StructureBacterial TypingEscherichia ColiGenomic Characterization Of PathogensMolecular Typing Of BacteriaMolecular Typing Of PathogensPhylogenetic Analysis Of PathogensPhylogenetic Tree Inference
CTX-M-55 was first discovered in Thailand in 2004, and today, this enzyme is the most common CTX-M subtype in E. coli of animal origin in China. Thus, bla CTX-M-55 -positive E. coli getting widely spread is a growing public health problem.
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Prokka: rapid prokaryotic genome annotation
Torsten Seemann · Bioinformatics · 2014 · 19.6K citations
The RAST Server: Rapid Annotations using Subsystems Technology
Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.8K citations · Full text
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
Andrew Rambaut, Alexei J. Drummond, Dong Xie et al. · Systematic Biology · 2018 · 11.3K citations · Full text