Bioinformatics · 2022 · 12 citations · 5 references
Life SciencesBioinformaticsEvolutionary BiologyData VisualizationInteractive VisualizationPhylogeneticsGenome VisualizationGenomic Data VisualizationMolecular PhylogenyPhylogenetic AnalysisPhylogenetic Tree ReconstructionTree VisualizationEvolutionary Tree VisualizationGenome Browser InfrastructureGenome Browser VisualizationHigh-throughput Sequence VisualizationPhylogenetic Tree VisualizationPhylogenomic VisualizationTree Evolution VisualizationWhole-genome Visualization
SUMMARY: Treenome Browser is a web browser tool to interactively visualize millions of genomes alongside huge phylogenetic trees. AVAILABILITY AND IMPLEMENTATION: Treenome Browser for SARS-CoV-2 can be accessed at cov2tree.org, or at taxonium.org for user-provided trees. Source code and documentation are available at github.com/theosanderson/taxonium and docs.taxonium.org/en/latest/treenome.html. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
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The UCSC Genome Browser database: 2022 update
Brian T. Lee, Galt P Barber, Anna Benet‐Pagès et al. · Nucleic Acids Research · 2021 · 306 citations · Full text
Taxonium, a web-based tool for exploring large phylogenetic trees
Theo Sanderson · eLife · 2022 · 76 citations · Full text