Harmful Algae · 2022 · 15 citations · 36 references
Life SciencesBiologyMicrobiologyMarine MicrobiologyMycologyPhylogeneticsMarine PhylogeneticsMicrobial PhylogenyMolecular PhylogenyChytridiomycota ClassificationDinoflagellate BloomsDinoflagellate TaxonomyMarine Fungal PhylogenyPhylogenetic CongruencePhylogenetic TaxonomySporangium AnatomySporangium Structure
A new chytrid genus and species was isolated and cultured from samples obtained in the Baltic Sea during a dinoflagellate bloom event. This species is characterized by having a spherical sporangium without papillae and zoospores of 2-3 µm in diameter that are released through 3 discharge pores. Molecular phylogeny based on ribosomal operon showed its sister position to the Dinomyces cluster in Rhizophydiales. Zoospores lack fenestrated cisternae but contain a paracrystalline inclusion, found in a Rhizophydiales representative for the first time. Additionally, the kinetid features are uncommon for Rhizophydiales and only observed in Dinomyces representatives so far. These morphological features and its phylogenetic relationships justify the description of the new genus and speciesParadinomyces triforaminorum gen. nov. sp. nov. belonging to the family Dinomycetaceae. The chytrid was detected during a high-biomass bloom of the dinoflagellate Kryptoperidinium foliaceum. Laboratory experiments suggest this species is highly specific and demonstrate the impact it can have on HAB development. The chytrid co-occurred with three other parasites belonging to Chytridiomycota (Fungi) and Perkinsea (Alveolata), highlighting that parasitic interactions are common during HABs in brackish and marine systems, and these multiple parasites compete for similar hosts.
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PCR protocols — A guide to methods and applications
Trends in Genetics · 1990 · 11.9K citations
UFBoot2: Improving the Ultrafast Bootstrap Approximation
Diep Thi Hoang, Olga Chernomor, Arndt von Haeseler et al. · Molecular Biology and Evolution · 2017 · 11K citations · Full text