Pharmacognosy Journal · 2022 · 40 citations · 29 references
PharmacyMedicinal ChemistryPharmacologyDrug DesignDrug DiscoveryStructure-activity RelationshipsEnzyme InhibitionMedicinal PlantsMolecular SimilarityNatural Product Drug DiscoveryStructure-activity Relationship AnalysisVirtual ScreeningAntiviral Structure-activity RelationshipsBioactive Plant CompoundsComputer-aided Drug DiscoveryHerbal Drug DiscoveryMolecular Docking Of InhibitorsPharmacological ScreeningSimilarity AnalysisSimilarity Searching
The global pandemic of COVID-19 has caused disastrous consequences for both humans and the economy. The purpose of this study was to determine the potential of juwet (Syzygium cumini L.) and moringa (Moringa oleifera L.) as inhibitors of RBD spike, helicase, Mpro, and RdRp activity of SARS-CoV-2 with an in-silico approach. Samples were obtained from PubChem and RSCB PDB databases. The drug similarity analysis was determined using Swiss ADME and the Lipinski rule of five. Prediction of antivirus probabilities is carried out with PASS Online. Molecular screening is performed by molecular docking using PyRx. Visualization was used using PyMol and Discovery Studio. The bioactive compounds with the best antiviral potential had the lowest affinity bonds to the target proteins against RBD spike, helicase, Mpro, and RdRp of SARS-CoV-2. Results show that ellagic acid from java plum and myricetin from moringa have the best potential as potential antivirals. However, more research is required to validate the results of these computational predictions.
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First Case of 2019 Novel Coronavirus in the United States
Michelle Holshue, Chas DeBolt, Scott Lindquist et al. · New England Journal of Medicine · 2020 · 6.4K citations · Full text
Structure of the RNA-dependent RNA polymerase from COVID-19 virus
Yan Gao, Liming Yan, Yucen Huang et al. · Science · 2020 · 1.7K citations · Full text