Antimicrobial Agents and Chemotherapy · 2022 · 15 citations · 32 references
Life SciencesInfectious DiseasesMicrobiologyAntimicrobial ResistanceDiagnostic MicrobiologyMedical MicrobiologyAntibiotic ResistanceAntibiotic Resistance MechanismsAntimicrobial Susceptibility TestingBacterial ToxinsGastrointestinal InfectionsPathogen DetectionAntibiotic Resistance GenesAntibiotic Sensitivity TestingAntibiotic Susceptibility Data AnalysisAntibiotic Susceptibility TestingClostridial InfectionsClostridial Toxin DetectionToxin DetectionToxin Genes
strains. Decreased susceptibility to antibiotics is not directly associated with either severe or recurrent CDI. However, antimicrobial susceptibility of C. difficile is decreased in strains positive for the binary toxin gene.
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Trimmomatic: a flexible trimmer for Illumina sequence data
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