Structure · 2022 · 31 citations · 79 references
Life SciencesBiochemistryBiophysicsBiomolecular ModelingComputational BiologyStructural BiologyConformational ChangeConformational DynamicsProtein ConformationProtein DynamicsProtein StructureProtein Structure ModelingLimited Data SetsProtein Conformational ChangesProtein Conformational DynamicsRosetta ModelingRosetta Refinement
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Highly accurate protein structure prediction with AlphaFold
John Jumper, Alexander Pritzel, Tim Green et al. · Nature · 2021 · 45.2K citations · Full text
CHARMM‐GUI: A web‐based graphical user interface for CHARMM
Sunhwan Jo, Taehoon Kim, Vidyashankara Iyer et al. · Journal of Computational Chemistry · 2008 · 9.7K citations
A Limited Memory Algorithm for Bound Constrained Optimization
Richard H. Byrd, Peihuang Lu, Jorge Nocedal et al. · SIAM Journal on Scientific Computing · 1995 · 6.2K citations
Accurate prediction of protein structures and interactions using a three-track neural network
Minkyung Baek, Frank DiMaio, Ivan Anishchenko et al. · Science · 2021 · 5.7K citations · Full text