Microbiology Spectrum · 2022 · 13 citations · 56 references
Life SciencesEcologyMicrobiologyAquatic MicrobiologyMarine EcologyMicrobial EcologyAquatic Microbial EcologyBacterial EcologyCoastal MicrobiologyMicrobial Community DynamicsMicrobial DiversityMicrobial Interactions In EcosystemsCommunity Assembly ProcessesEcological Assembly ProcessesHeterogeneous EnvironmentsMicrobial Co-occurrence NetworksMicrobial Community CompositionMicrobial Community DiversityMicrobial Community EcologySeawater Microbial Communities
A growing number of studies have examined roles of microbial community assembly in modulating community composition. However, the relationships between community assembly and microbial interactions are not fully understood and rarely tested, especially in eutrophic waters. In this study, we built a conceptual model that links seasonal microbial interactions to ecological processes, which has not been reported before. The model showed that heterogeneous selection plays an important role in driving community assembly during low-temperature seasons, resulting in higher β-diversity and more tightly connected networks. In contrast, drift became a dominant force during high-temperature seasons, leading to declines in the β-diversity and network associations. This model could function as a new framework to predict how prokaryotic communities respond to intensified eutrophication induced by climate change in coastal environment.
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Search and clustering orders of magnitude faster than BLAST
R. C. Edgar · Bioinformatics · 2010 · 21.7K citations · Full text
UCHIME improves sensitivity and speed of chimera detection
R. C. Edgar, Brian J. Haas, José C. Clemente et al. · Bioinformatics · 2011 · 15.5K citations · Full text
Life Sciences, Biology, Microbiology +17
The igraph software package for complex network research
Gábor Csárdi, Tamás Nepusz · Medical Entomology and Zoology · 2006 · 10.4K citations