Concepedia
Nature Communications · 2022 · 34 citations · 54 references
Open access
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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 94.7K citations · Full text
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 66.2K citations · Full text
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao, Gordon K. Smyth, Wei Shi · Bioinformatics · 2013 · 27.4K citations · Full text
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim, Ben Langmead, Steven L. Salzberg · Nature Methods · 2015 · 24.9K citations · Full text
Hardware Security, Engineering, Hardware Acceleration +7
JTK_CYCLE: An Efficient Nonparametric Algorithm for Detecting Rhythmic Components in Genome-Scale Data Sets
Michael E. Hughes, John B. Hogenesch, Karl Kornacker · Journal of Biological Rhythms · 2010 · 1.1K citations · Full text