Frontiers in Oncology · 2022 · 30 citations · 23 references
Life SciencesMicrobiologyOncologyMetagenomicsMicrobial EcologyMicrobiome Research16S Ribosomal Ribonucleic Acid AnalysisGut MicrobiotaMicrobial Community ProfilingMicrobial DiversityMicrobiome CompositionMicrobiome Diversity16S Ribosomal Ribonucleic Acid Gene Profiling16S Ribosomal Rna Gene SequencingBeta DiversityBeta Diversity PatternsMicrobial Diversity AssessmentRelative Abundance AnalysisRna SequencingRna Sequencing (Rna-seq)
Introduction Previous studies have reported a close relationship between cancer and microbes, particularly gut and tumor microbiota; however, the presence of tumor microbiome in nasopharyngeal carcinoma (NPC) and its role in the prognosis of NPC remain unclear. Methods We collected 64 samples including tissues from 50 patients with NPC (NPC group) and 14 patients with chronic nasopharyngitis (control group) receiver operating characteristics and we applied 16S ribosome RNA gene sequencing of all samples to assess microbiome profiles and immunohistochemistry to detect tumor microbiome in NPC. Results Patients in the control group harbored higher species diversity than those in the NPC group; however, the beta diversity was more distinct in the NPC group. In total, three genera with statistically significant differences between the two groups were identified. The area under the receiver operating characteristics (ROC) curve (AUC) was calculated using the relative abundance of these three significant genera, and a value of 0.842 was achieved. Furthermore, Turicibacter was confirmed as a potentially independent prognostic factor for NPC patients, and the progression-free survival (PFS) was markedly prolonged in patients with a low relative abundance of Turicibacter compared to patients with a high relative abundance of this genus (cutoff: 0.0046, hazard ratio: 5.10, 95% confidence interval: 2.04–12.77, p = 0.004). Conclusions The present study provided strong evidence of a correlation between tumor microbiome and NPC; the tumor microbiome may be considered a biomarker for early NPC diagnosis. Turicibacter potentially served as a independently prognostic indicator for NPC patients.
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