Concepedia

Performance of halotolerant bacteria associated with Sahara-inhabiting halophytes Atriplex halimus L. and Lygeum spartum L. ameliorate tomato plant growth and tolerance to saline stress: from selective isolation to genomic analysis of potential determinants

Guendouz Dif, Hadj Ahmed Belaouni, Amine Yekkour, Yacine Goudjal, Nadjette Djemouaı, Eliška Peňázová, Jana Čechová, Akila Berraf-Tebbal, Aleš Eichmeier, Abdelghani Zitouni

World Journal of Microbiology and Biotechnology · 2021 · 25 citations · 88 references

References

88

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +13

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

Life Sciences, Bioinformatics, Molecular Biology +11

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

Sudhir Kumar, Glen Stecher, Michael Li et al. · Molecular Biology and Evolution · 2018 · 38.8K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +11

Prokka: rapid prokaryotic genome annotation

Torsten Seemann · Bioinformatics · 2014 · 19.6K citations

Life Sciences, Bioinformatics, Microbiology +13

QUAST: quality assessment tool for genome assemblies

Alexey Gurevich, Vladislav Saveliev, Nikolay Vyahhi et al. · Bioinformatics · 2013 · 11.5K citations · Full text

Life Sciences, Bioinformatics, Biology +14