Computational and Structural Biotechnology Journal · 2021 · 11 citations · 19 references
Life SciencesBiochemistryMolecular BiologyCalcium HomeostasisMembrane BiochemistryMembrane BiophysicsCalcium SignalingCalcium Transport ProteinsCardiac Ion ChannelsIntracellular Calcium SignalingMembrane DomainsMembrane ProteinsAuxiliary SubunitsCalcium Handling In CardiomyocytesCalcium PumpsCalcium-binding Transport ProteinsCardiac Calcium HandlingRyanodine ReceptorsSarcoplasmic ProteinsSarcoplasmic Reticulum Calcium Atpases
-ATPase, SERCA). PLN and SLN share highly conserved leucine zipper motifs that control self-association; consequently, it has been proposed that both PLN and SLN assemble into stable pentamers in the membrane. In this study, we used molecular dynamics (MD) simulations and Western blot analysis to investigate the precise molecular architecture of the PLN and SLN oligomers. Analysis showed that the PLN pentamer is the predominant oligomer present in mouse ventricles and ventricle-like human iPSC-derived cardiomyocytes, in agreement with the MD simulations showing stable leucine zipper interactions across all protomer-protomer interfaces and MD replicates. Interestingly, we found that the PLN pentamer populates an asymmetric structure of the transmembrane region, which is likely an intrinsic feature of the oligomer in a lipid bilayer. The SLN pentamer is not favorably formed across MD replicates and species of origin; instead, SLN from human and mouse atria primarily populate coexisting dimeric and trimeric states. In contrast to previous studies, our findings indicate that the SLN pentamer is not the predominant oligomeric state populated in the membrane. We conclude that despite their structural homology, PLN and SLN adopt distinct oligomeric states in the membrane. We propose that the distinct oligomeric states populated by PLN and SLN may contribute to tissue-specific SERCA regulation via differences in protomer-oligomer exchange, oligomer-SERCA dynamics, and noise filtering during β-adrenergic stimulation in the heart.
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The Xplor-NIH NMR molecular structure determination package
Charles D. Schwieters, John Kuszewski, Nico Tjandra et al. · Journal of Magnetic Resonance · 2003 · 2.4K citations
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Rajeswari Mani, Sarah D. Cady, Ming Tang et al. · Proceedings of the National Academy of Sciences · 2006 · 249 citations · Full text
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