Journal of Clinical Laboratory Analysis · 2021 · 15 citations · 35 references
MedicineCancer BiologyOncologyMetastasisMolecular OncologyTumor MicroenvironmentCancer BiomarkersCancer TranscriptomicsMalignant NeoplasmsMolecular Tumor ProfilingTranscriptomic ProfilingTumor MarkersDisease Prognostic BiomarkersMolecular Prognostic MarkersPrognostic Biomarker DiscoveryPrognostic BiomarkersPrognostic Expression SignaturesPrognostic Rna BiomarkersPrognostic Tumor MarkersTumor-specific Biomarkers
BACKGROUND: Although there are standard treatment options for osteosarcoma (OS), the prognoses of patients with OS remain varied. Therefore, it is important to profile OS patients at a high risk of mortality to develop focused interventions. Although tumor biomarkers are closely associated with clinical outcomes, data on prognostic biomarkers for OS remain scarce. METHODS: We collected RNA expression profiles and clinical data of 90 OS patients from the GEO database (dataset GSE21257 and GSE39055) and 96 patients in the TARGET program. The data were analyzed using univariate Kaplan-Meier survival analysis to screen candidate gene sets that might be associated with OS survival. RESULTS: Our analysis demonstrated that melanoma cell adhesion molecule (MCAM) was associated with overall survival of patients with OS in the three cohorts. The data showed that MCAM was upregulated in OS patients who had metastases within 5 years compared to those without metastases. GO analysis revealed that genes correlated with MCAM were mainly involved in cell migration and wound healing processes. In addition, wound healing assays and gene set enrichment analysis results from RNA sequencing data of small interfering (si)-MCAM-transfected OS cells demonstrated that MCAM modulated tumor cell migration. CONCLUSIONS: Our data demonstrate that MCAM may be a novel prognostic biomarker for OS. MCAM is associated with increased cell migration ability and risk of metastasis, thus leading to poor prognoses in OS patients.
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Osteosarcoma incidence and survival rates from 1973 to 2004
Rebecca Troisi, Sharon A. Savage · Cancer · 2009 · 2.2K citations · Full text
Stefan Bielack, Beate Kempf‐Bielack, G. Delling et al. · Journal of Clinical Oncology · 2002 · 1.8K citations
NCBI GEO: archive for functional genomics data sets--10 years on
Tanya Barrett, D. B. Troup, S. E. Wilhite et al. · Nucleic Acids Research · 2010 · 1.1K citations · Full text
Emilie P. Buddingh, Marieke L. Kuijjer, R.A.J. Duim et al. · Clinical Cancer Research · 2011 · 510 citations · Full text
Medicine, Cancer Biology, Oncology +17