International Journal of Environmental Research and Public Health · 2021 · 16 citations · 32 references
Public HealthInfectious Disease ControlInfectious DiseasesEpidemiologyFeature EngineeringPublic Health SurveillanceDeep LearningDisease ForecastingEpidemic ForecastingMultivariate ForecastingPredictive Health ModelingTime-series Analysis In EpidemiologyDeep Learning For ForecastingDeep Learning For Time Series ForecastingDeep Learning-based ForecastingForecast Performance EvaluationInput Data AnalysisPrincipal ComponentsTransmission Rate EstimationTransmission Rates
In this paper, we investigate the influence of holidays and community mobility on the transmission rate and death count of COVID-19 in Brazil. We identify national holidays and hallmark holidays to assess their effect on disease reports of confirmed cases and deaths. First, we use a one-variate model with the number of infected people as input data to forecast the number of deaths. This simple model is compared with a more robust deep learning multi-variate model that uses mobility and transmission rates (R0, Re) from a SEIRD model as input data. A principal components model of community mobility, generated by the principal component analysis (PCA) method, is added to improve the input features for the multi-variate model. The deep learning model architecture is an LSTM stacked layer combined with a dense layer to regress daily deaths caused by COVID-19. The multi-variate model incremented with engineered input features can enhance the forecast performance by up to 18.99% compared to the standard one-variate data-driven model.
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