ikra : RNAseq pipeline centered on Salmon.

Yu Hiraoka, Kohki Yamada, Yusuke Kawasaki, Haruka Hirose, Yasunari Matsumoto, Kaito Ishikawa, Yoshiaki Yasumizu

Zenodo (CERN European Organization for Nuclear Research) · 2019 · 12 citations · 0 references

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Abstract

A gene expression table (gene × sample) is automatically created from the experiment matrix. The output can be used as an input of idep. Ikra is an RNAseq pipeline centered on salmon.