Proceedings of the National Academy of Sciences · 2021 · 103 citations · 52 references
Life SciencesPlant BiologyPlant SciencesPlant EcologySoil EcologySoil MicrobiologyAbiotic Stress ToleranceDrought TolerancePlant MicrobiomePlant TranscriptomicsPlant-associated Microbial CommunitiesRhizosphere EcologyAbiotic Stress CharacterizationDesert Microbial EcologyEcological GenomicsPlant-soil-microbe InteractionsRoot-associated FungiSoil Biota DiversityTranscriptomics Of Soil MicrobesUltraviolet Solar Irradiance
Significance In the current changing climate, it is essential to improve crop production and resilience under dry and nutrient-poor conditions. Desert plants have naturally evolved to flourish under such conditions. Therefore, understanding the underlying mechanisms for their adaptation can potentially help to ensure food security. The Atacama Desert, the driest nonpolar place on Earth, offers a unique opportunity to explore plant adaptations to extreme environmental conditions. Here, we reveal how the adaptive strategies common or specific to the major plant lineages in the Atacama include enrichment of plant growth-promoting bacteria near their roots and positive selection of genes that are associated with key beneficial processes for plant survival. These strategies can potentially direct the molecular breeding or engineering of resilient crops.
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PAML 4: Phylogenetic Analysis by Maximum Likelihood
Molecular Biology and Evolution · 2007 · 14.8K citations · Full text
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simão, Robert M. Waterhouse, Panagiotis Ioannidis et al. · Bioinformatics · 2015 · 14.5K citations · Full text